BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005C05LP1|AL425347
(997 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1743 1861 0.0
>3x_Contig1743
Length = 20172
Score = 1861 bits (929), Expect = 0.0
Identities = 973/997 (97%), Gaps = 1/997 (0%)
Strand = Plus / Plus
Query: 1 aatcaaattcttgataaagctaacttgcgtgacgcagaagacgacgatgaaagccaggtc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 11865 aatcaaattcttgataaagctaacttgcgtgacgcagaagacgacgatgaaagcaaggtc 11924
Query: 61 attgaagaacaattaaatcagctagatcttatagattttgatgatgatgatgaaagcgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11925 attgaagaacaattaaatcagctagatcttatagattttgatgatgatgatgaaagcgac 11984
Query: 121 aaammatcagctaaatcctatgamactatgtcaactttgcctcatgccagatttaacgct 180
||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 11985 aaaaaatcagctaaatcctatgaaactatgtcaactttgcctcatgccagatttaacgct 12044
Query: 181 gcgactgctgttgtggatgatacgttattcatcttcggtggtactgttgamattggcgaa 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 12045 gcgactgctgttgtggatgatacgttattcatcttcggtggtactgttgaaattggcgaa 12104
Query: 241 amagactatccaatcgactccttttatcagcattgatatgvmcmaacttgatggggtgaa 300
| |||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||
Sbjct: 12105 aaagactatccaatcgactcctttta-cagcattgatatgaacaaacttgatggggtgaa 12163
Query: 301 ggtgtactgggaagagttgaaggaagttgaaagagcagagaaacttggagagcmagattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 12164 ggtgtactgggaagagttgaaggaagttgaaagagcagagaaacttggagagcaagattc 12223
Query: 361 tgacgatgaatttggcgatgaagacgacgatgatgaagacgacggtgaagaagagattgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12224 tgacgatgaatttggcgatgaagacgacgatgatgaagacgacggtgaagaagagattgt 12283
Query: 421 tgacagtcaacttgaagctgaagacgaagaagaagaagaagaagaggaagaagtggaaga 480
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12284 tgacagtaaacttgaagctgaagacgaagaagaagaagaagaagaggaagaagtggaaga 12343
Query: 481 mgagtacgamattccggmtcttagaccttggttgcctcatcccaaggcttttgacaccct 540
|||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 12344 agagtacgaaattccggatcttagaccttggttgcctcatcccaaggcttttgaaaccct 12403
Query: 541 tcgtgcattttacgttcgcacaggtcctactttcttagaattggctatttccagtaatag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12404 tcgtgcattttacgttcgcacaggtcctactttcttagaattggctatttccagtaatag 12463
Query: 601 agactcaaaaggtaagcctttgamgacaaaatcgttcgagttatgccaagmtcggtggtg 660
||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 12464 agactcaaaaggtaagcatttgaagacaaaatcgttcgagttatgccaagatcggtggtg 12523
Query: 661 ggaaagacgtgagchagttcggattgaggaagataaattagaagaacttggaggggtcga 720
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12524 ggaaagacgtgagcaagttcggattgaggaagataaattagaagaacttggaggggtcga 12583
Query: 721 agatgttattgaaaaggatacatcaaaaacccaacgccgaagtatatctagtaaaagtta 780
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 12584 agatgttattgaaaaggatacatcaaaaacccaacgccgaaggtaatctagtaaaagtta 12643
Query: 781 caaaatatatacagtacttagttgatgaagacgaaatattagatgcttttccctgtattc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12644 caaaatatatacagtacttagttgatgaagacgaaatattagatgcttttccctgtattc 12703
Query: 841 tgcattctgacagtattttgaggcagttggcttttaccatacattaatccaaacacgtga 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12704 tgcattctgacagtattttgaggcagttggcttttaccatacattaatccaaacacgtga 12763
Query: 901 ctttgtttgaattgcactgtcgcgccccatgaaaaacgctttaggatattcgatggagga 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12764 ctttgtttgaattgcactgtcgcgccccatgaaaaacgctttaggatattcgatggagga 12823
Query: 961 ttaataaagagtgcmatgaacaacggctggtttgaca 997
|||||||||||||| ||||||||||||||||||||||
Sbjct: 12824 ttaataaagagtgcaatgaacaacggctggtttgaca 12860
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,407
Number of Sequences: 1807
Number of extensions: 10407
Number of successful extensions: 837
Number of sequences better than 1.0e-20: 1
length of query: 997
length of database: 10,358,551
effective HSP length: 16
effective length of query: 981
effective length of database: 10,329,639
effective search space: 10133375859
effective search space used: 10133375859
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)